PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KWH4D
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 328aa    MW: 36723.9 Da    PI: 6.8721
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KWH4DgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.2e-10238280855
                  HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  + ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  Aradu.KWH4D 238 AAKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAISYVKFLQ 280
                  569*******************5.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.288230279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-12231288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.25E-10232284No hitNo description
SuperFamilySSF474592.62E-13232288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-11236285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.9E-7240280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MALARDQIPH DSSMGSKVQS CVFNENNEYH KSVLEEEDGS QSTNGFSNDS AITHSPPLCG  60
NAYAYKATNY QLEEEQQSLI DFKGSCYNTL TQVASESLLN FEQNRMVPGN SYMKDDTNVW  120
DNNLHHQWSQ ISPRSTSELR PVQDSSCFQS SSSSYSTIVN SAKEKQLHGE SSSYGWFYSQ  180
QTIPAHSIQD PAVQEPISKK RISMQAEKMK AAKKQCTDES KMPKSNKLGA SKDPQSVAAK  240
NRRERISERL KILQELVPNG SKVDLVTMLE KAISYVKFLQ LQVKVLAADE FWPVQGGKAP  300
DISQVKEAID AILSSQRSEK QVQQPQSR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311235e-85KT031123.1 Glycine max clone HN_CCL_81 bHLH transcription factor (Glyma14g07590.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015956652.10.0PREDICTED: putative transcription factor bHLH086 isoform X1
TrEMBLI1MZD51e-142I1MZD5_SOYBN; Uncharacterized protein
STRINGGLYMA18G04420.11e-142(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49373253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.11e-53RHD SIX-LIKE 1